Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA89214.1 | SFB40492.1 | SAMN04489723_102191 | SAMN04489723_10957 | Kef-type K+ transport system, membrane component KefB. | Modulator of drug activity B. | 0.444 |
SFA91247.1 | SFB40492.1 | SAMN04489723_102277 | SAMN04489723_10957 | Kef-type K+ transport system, membrane component KefB. | Modulator of drug activity B. | 0.444 |
SFB02166.1 | SFB40492.1 | SAMN04489723_103277 | SAMN04489723_10957 | Diaminopimelate decarboxylase. | Modulator of drug activity B. | 0.610 |
SFB02166.1 | lysA | SAMN04489723_103277 | SAMN04489723_11520 | Diaminopimelate decarboxylase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.597 |
SFB09960.1 | SFB40492.1 | SAMN04489723_104192 | SAMN04489723_10957 | HD domain-containing protein. | Modulator of drug activity B. | 0.432 |
SFB09960.1 | SFB40514.1 | SAMN04489723_104192 | SAMN04489723_10958 | HD domain-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.503 |
SFB17290.1 | SFB40492.1 | SAMN04489723_10583 | SAMN04489723_10957 | Multimeric flavodoxin WrbA. | Modulator of drug activity B. | 0.484 |
SFB40473.1 | SFB40492.1 | SAMN04489723_10956 | SAMN04489723_10957 | Quinol monooxygenase YgiN. | Modulator of drug activity B. | 0.908 |
SFB40473.1 | SFB40514.1 | SAMN04489723_10956 | SAMN04489723_10958 | Quinol monooxygenase YgiN. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.787 |
SFB40492.1 | SFA89214.1 | SAMN04489723_10957 | SAMN04489723_102191 | Modulator of drug activity B. | Kef-type K+ transport system, membrane component KefB. | 0.444 |
SFB40492.1 | SFA91247.1 | SAMN04489723_10957 | SAMN04489723_102277 | Modulator of drug activity B. | Kef-type K+ transport system, membrane component KefB. | 0.444 |
SFB40492.1 | SFB02166.1 | SAMN04489723_10957 | SAMN04489723_103277 | Modulator of drug activity B. | Diaminopimelate decarboxylase. | 0.610 |
SFB40492.1 | SFB09960.1 | SAMN04489723_10957 | SAMN04489723_104192 | Modulator of drug activity B. | HD domain-containing protein. | 0.432 |
SFB40492.1 | SFB17290.1 | SAMN04489723_10957 | SAMN04489723_10583 | Modulator of drug activity B. | Multimeric flavodoxin WrbA. | 0.484 |
SFB40492.1 | SFB40473.1 | SAMN04489723_10957 | SAMN04489723_10956 | Modulator of drug activity B. | Quinol monooxygenase YgiN. | 0.908 |
SFB40492.1 | SFB40514.1 | SAMN04489723_10957 | SAMN04489723_10958 | Modulator of drug activity B. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.886 |
SFB40492.1 | SFB60493.1 | SAMN04489723_10957 | SAMN04489723_12926 | Modulator of drug activity B. | Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. | 0.921 |
SFB40492.1 | lysA | SAMN04489723_10957 | SAMN04489723_11520 | Modulator of drug activity B. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.610 |
SFB40492.1 | menA | SAMN04489723_10957 | SAMN04489723_104189 | Modulator of drug activity B. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.437 |
SFB40514.1 | SFB09960.1 | SAMN04489723_10958 | SAMN04489723_104192 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | HD domain-containing protein. | 0.503 |
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