Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80499.1 | SFB36466.1 | SAMN04489723_101408 | SAMN04489723_10868 | Glutamate synthase (NADH) large subunit. | PAS domain S-box-containing protein. | 0.450 |
SFA80499.1 | SFB40514.1 | SAMN04489723_101408 | SAMN04489723_10958 | Glutamate synthase (NADH) large subunit. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.434 |
SFA92834.1 | SFA92858.1 | SAMN04489723_102353 | SAMN04489723_102354 | Outer membrane receptor for ferrienterochelin and colicins. | HmuY protein. | 0.934 |
SFA92834.1 | SFB40514.1 | SAMN04489723_102353 | SAMN04489723_10958 | Outer membrane receptor for ferrienterochelin and colicins. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.495 |
SFA92858.1 | SFA92834.1 | SAMN04489723_102354 | SAMN04489723_102353 | HmuY protein. | Outer membrane receptor for ferrienterochelin and colicins. | 0.934 |
SFA92858.1 | SFB40514.1 | SAMN04489723_102354 | SAMN04489723_10958 | HmuY protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.472 |
SFB05723.1 | SFB05797.1 | SAMN04489723_1042 | SAMN04489723_1045 | DUF218 domain-containing protein. | Starch-binding associating with outer membrane. | 0.828 |
SFB05723.1 | SFB40514.1 | SAMN04489723_1042 | SAMN04489723_10958 | DUF218 domain-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.411 |
SFB05797.1 | SFB05723.1 | SAMN04489723_1045 | SAMN04489723_1042 | Starch-binding associating with outer membrane. | DUF218 domain-containing protein. | 0.828 |
SFB05797.1 | SFB40514.1 | SAMN04489723_1045 | SAMN04489723_10958 | Starch-binding associating with outer membrane. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.514 |
SFB09960.1 | SFB09991.1 | SAMN04489723_104192 | SAMN04489723_104194 | HD domain-containing protein. | Calcineurin-like phosphoesterase. | 0.899 |
SFB09960.1 | SFB40492.1 | SAMN04489723_104192 | SAMN04489723_10957 | HD domain-containing protein. | Modulator of drug activity B. | 0.432 |
SFB09960.1 | SFB40514.1 | SAMN04489723_104192 | SAMN04489723_10958 | HD domain-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.503 |
SFB09991.1 | SFB09960.1 | SAMN04489723_104194 | SAMN04489723_104192 | Calcineurin-like phosphoesterase. | HD domain-containing protein. | 0.899 |
SFB09991.1 | SFB40492.1 | SAMN04489723_104194 | SAMN04489723_10957 | Calcineurin-like phosphoesterase. | Modulator of drug activity B. | 0.406 |
SFB09991.1 | SFB40514.1 | SAMN04489723_104194 | SAMN04489723_10958 | Calcineurin-like phosphoesterase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.414 |
SFB36466.1 | SFA80499.1 | SAMN04489723_10868 | SAMN04489723_101408 | PAS domain S-box-containing protein. | Glutamate synthase (NADH) large subunit. | 0.450 |
SFB36466.1 | SFB40514.1 | SAMN04489723_10868 | SAMN04489723_10958 | PAS domain S-box-containing protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.516 |
SFB40473.1 | SFB40492.1 | SAMN04489723_10956 | SAMN04489723_10957 | Quinol monooxygenase YgiN. | Modulator of drug activity B. | 0.908 |
SFB40473.1 | SFB40514.1 | SAMN04489723_10956 | SAMN04489723_10958 | Quinol monooxygenase YgiN. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.787 |
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