STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB44500.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
SFB60356.1
Membrane dipeptidase (Peptidase family M19).
  
     0.630
SFB47084.1
C-terminal domain of CHU protein family protein.
  
     0.585
SFB44518.1
Hypothetical protein.
 
     0.581
SFB19807.1
Hypothetical protein.
  
     0.564
SFB51081.1
Hypothetical protein.
  
     0.549
SFB58426.1
Glycosyltransferase WbsX.
  
     0.548
SFB44509.1
Protein of unknown function.
 
     0.543
SFB36040.1
ADP-ribosylglycohydrolase.
  
     0.539
SFB10922.1
Ion channel.
  
     0.532
SFA98452.1
Hypothetical protein.
  
     0.519
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.