Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB43594.1 | SFB43628.1 | SAMN04489723_11062 | SAMN04489723_11064 | Murein L,D-transpeptidase YcbB/YkuD. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | 0.773 |
SFB43594.1 | SFB43643.1 | SAMN04489723_11062 | SAMN04489723_11065 | Murein L,D-transpeptidase YcbB/YkuD. | Predicted amidohydrolase. | 0.773 |
SFB43594.1 | SFB43657.1 | SAMN04489723_11062 | SAMN04489723_11066 | Murein L,D-transpeptidase YcbB/YkuD. | Mechanosensitive ion channel. | 0.515 |
SFB43594.1 | SFB43672.1 | SAMN04489723_11062 | SAMN04489723_11067 | Murein L,D-transpeptidase YcbB/YkuD. | Outer membrane protein beta-barrel domain-containing protein. | 0.578 |
SFB43594.1 | kdsA | SAMN04489723_11062 | SAMN04489723_11063 | Murein L,D-transpeptidase YcbB/YkuD. | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.773 |
SFB43628.1 | SFB43594.1 | SAMN04489723_11064 | SAMN04489723_11062 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | Murein L,D-transpeptidase YcbB/YkuD. | 0.773 |
SFB43628.1 | SFB43643.1 | SAMN04489723_11064 | SAMN04489723_11065 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | Predicted amidohydrolase. | 0.781 |
SFB43628.1 | SFB43657.1 | SAMN04489723_11064 | SAMN04489723_11066 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | Mechanosensitive ion channel. | 0.573 |
SFB43628.1 | SFB43672.1 | SAMN04489723_11064 | SAMN04489723_11067 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | Outer membrane protein beta-barrel domain-containing protein. | 0.505 |
SFB43628.1 | kdsA | SAMN04489723_11064 | SAMN04489723_11063 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.998 |
SFB43643.1 | SFB43594.1 | SAMN04489723_11065 | SAMN04489723_11062 | Predicted amidohydrolase. | Murein L,D-transpeptidase YcbB/YkuD. | 0.773 |
SFB43643.1 | SFB43628.1 | SAMN04489723_11065 | SAMN04489723_11064 | Predicted amidohydrolase. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | 0.781 |
SFB43643.1 | SFB43657.1 | SAMN04489723_11065 | SAMN04489723_11066 | Predicted amidohydrolase. | Mechanosensitive ion channel. | 0.515 |
SFB43643.1 | SFB43672.1 | SAMN04489723_11065 | SAMN04489723_11067 | Predicted amidohydrolase. | Outer membrane protein beta-barrel domain-containing protein. | 0.505 |
SFB43643.1 | kdsA | SAMN04489723_11065 | SAMN04489723_11063 | Predicted amidohydrolase. | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.781 |
SFB43657.1 | SFB43594.1 | SAMN04489723_11066 | SAMN04489723_11062 | Mechanosensitive ion channel. | Murein L,D-transpeptidase YcbB/YkuD. | 0.515 |
SFB43657.1 | SFB43628.1 | SAMN04489723_11066 | SAMN04489723_11064 | Mechanosensitive ion channel. | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase). | 0.573 |
SFB43657.1 | SFB43643.1 | SAMN04489723_11066 | SAMN04489723_11065 | Mechanosensitive ion channel. | Predicted amidohydrolase. | 0.515 |
SFB43657.1 | SFB43672.1 | SAMN04489723_11066 | SAMN04489723_11067 | Mechanosensitive ion channel. | Outer membrane protein beta-barrel domain-containing protein. | 0.757 |
SFB43657.1 | kdsA | SAMN04489723_11066 | SAMN04489723_11063 | Mechanosensitive ion channel. | 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family. | 0.533 |
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