Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80185.1 | SFA80203.1 | SAMN04489723_101393 | SAMN04489723_101394 | Transglutaminase-like superfamily protein. | Protein of unknown function. | 0.948 |
SFA80185.1 | SFB45451.1 | SAMN04489723_101393 | SAMN04489723_11112 | Transglutaminase-like superfamily protein. | CarboxypepD_reg-like domain-containing protein. | 0.479 |
SFA80185.1 | SFB61417.1 | SAMN04489723_101393 | SAMN04489723_13415 | Transglutaminase-like superfamily protein. | Protein of unknown function. | 0.414 |
SFA80203.1 | SFA80185.1 | SAMN04489723_101394 | SAMN04489723_101393 | Protein of unknown function. | Transglutaminase-like superfamily protein. | 0.948 |
SFA80203.1 | SFB09761.1 | SAMN04489723_101394 | SAMN04489723_104180 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.420 |
SFA80203.1 | SFB27189.1 | SAMN04489723_101394 | SAMN04489723_106211 | Protein of unknown function. | Protein of unknown function. | 0.410 |
SFA80203.1 | SFB45451.1 | SAMN04489723_101394 | SAMN04489723_11112 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.474 |
SFA80203.1 | SFB61417.1 | SAMN04489723_101394 | SAMN04489723_13415 | Protein of unknown function. | Protein of unknown function. | 0.441 |
SFA93011.1 | SFB09761.1 | SAMN04489723_102362 | SAMN04489723_104180 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.578 |
SFA93011.1 | SFB45451.1 | SAMN04489723_102362 | SAMN04489723_11112 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.497 |
SFB09761.1 | SFA80203.1 | SAMN04489723_104180 | SAMN04489723_101394 | CarboxypepD_reg-like domain-containing protein. | Protein of unknown function. | 0.420 |
SFB09761.1 | SFA93011.1 | SAMN04489723_104180 | SAMN04489723_102362 | CarboxypepD_reg-like domain-containing protein. | Hypothetical protein. | 0.578 |
SFB09761.1 | SFB37139.1 | SAMN04489723_104180 | SAMN04489723_108116 | CarboxypepD_reg-like domain-containing protein. | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.453 |
SFB09761.1 | SFB45451.1 | SAMN04489723_104180 | SAMN04489723_11112 | CarboxypepD_reg-like domain-containing protein. | CarboxypepD_reg-like domain-containing protein. | 0.487 |
SFB09761.1 | SFB48708.1 | SAMN04489723_104180 | SAMN04489723_1138 | CarboxypepD_reg-like domain-containing protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.609 |
SFB09761.1 | SFB61417.1 | SAMN04489723_104180 | SAMN04489723_13415 | CarboxypepD_reg-like domain-containing protein. | Protein of unknown function. | 0.416 |
SFB12197.1 | SFB45451.1 | SAMN04489723_104314 | SAMN04489723_11112 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.502 |
SFB27189.1 | SFA80203.1 | SAMN04489723_106211 | SAMN04489723_101394 | Protein of unknown function. | Protein of unknown function. | 0.410 |
SFB27189.1 | SFB45451.1 | SAMN04489723_106211 | SAMN04489723_11112 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.551 |
SFB37139.1 | SFB09761.1 | SAMN04489723_108116 | SAMN04489723_104180 | TonB family C-terminal domain-containing protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | CarboxypepD_reg-like domain-containing protein. | 0.453 |
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