Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA79912.1 | SFA80499.1 | SAMN04489723_101380 | SAMN04489723_101408 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Glutamate synthase (NADH) large subunit. | 0.840 |
SFA79912.1 | SFB48197.1 | SAMN04489723_101380 | SAMN04489723_112119 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | TolB-like 6-blade propeller-like. | 0.483 |
SFA80499.1 | SFA79912.1 | SAMN04489723_101408 | SAMN04489723_101380 | Glutamate synthase (NADH) large subunit. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.840 |
SFA80499.1 | SFB48197.1 | SAMN04489723_101408 | SAMN04489723_112119 | Glutamate synthase (NADH) large subunit. | TolB-like 6-blade propeller-like. | 0.816 |
SFA80499.1 | SFB60451.1 | SAMN04489723_101408 | SAMN04489723_12920 | Glutamate synthase (NADH) large subunit. | Dissimilatory nitrite reductase (NO-forming), copper type apoprotein. | 0.847 |
SFA80499.1 | guaA | SAMN04489723_101408 | SAMN04489723_11048 | Glutamate synthase (NADH) large subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.913 |
SFB08499.1 | SFB48197.1 | SAMN04489723_104121 | SAMN04489723_112119 | Putative membrane-bound dehydrogenase domain-containing protein. | TolB-like 6-blade propeller-like. | 0.422 |
SFB08499.1 | SFB60451.1 | SAMN04489723_104121 | SAMN04489723_12920 | Putative membrane-bound dehydrogenase domain-containing protein. | Dissimilatory nitrite reductase (NO-forming), copper type apoprotein. | 0.526 |
SFB17435.1 | SFB48197.1 | SAMN04489723_10593 | SAMN04489723_112119 | Haem-binding domain-containing protein. | TolB-like 6-blade propeller-like. | 0.473 |
SFB48188.1 | SFB48197.1 | SAMN04489723_112118 | SAMN04489723_112119 | Ribosomal protein S18 acetylase RimI. | TolB-like 6-blade propeller-like. | 0.527 |
SFB48188.1 | SFB48208.1 | SAMN04489723_112118 | SAMN04489723_112120 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.418 |
SFB48197.1 | SFA79912.1 | SAMN04489723_112119 | SAMN04489723_101380 | TolB-like 6-blade propeller-like. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.483 |
SFB48197.1 | SFA80499.1 | SAMN04489723_112119 | SAMN04489723_101408 | TolB-like 6-blade propeller-like. | Glutamate synthase (NADH) large subunit. | 0.816 |
SFB48197.1 | SFB08499.1 | SAMN04489723_112119 | SAMN04489723_104121 | TolB-like 6-blade propeller-like. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.422 |
SFB48197.1 | SFB17435.1 | SAMN04489723_112119 | SAMN04489723_10593 | TolB-like 6-blade propeller-like. | Haem-binding domain-containing protein. | 0.473 |
SFB48197.1 | SFB48188.1 | SAMN04489723_112119 | SAMN04489723_112118 | TolB-like 6-blade propeller-like. | Ribosomal protein S18 acetylase RimI. | 0.527 |
SFB48197.1 | SFB48208.1 | SAMN04489723_112119 | SAMN04489723_112120 | TolB-like 6-blade propeller-like. | Hypothetical protein. | 0.596 |
SFB48197.1 | SFB56738.1 | SAMN04489723_112119 | SAMN04489723_12139 | TolB-like 6-blade propeller-like. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.558 |
SFB48197.1 | SFB60451.1 | SAMN04489723_112119 | SAMN04489723_12920 | TolB-like 6-blade propeller-like. | Dissimilatory nitrite reductase (NO-forming), copper type apoprotein. | 0.587 |
SFB48197.1 | guaA | SAMN04489723_112119 | SAMN04489723_11048 | TolB-like 6-blade propeller-like. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.522 |
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