STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB47046.1Oxidoreductase family, NAD-binding Rossmann fold. (498 aa)    
Predicted Functional Partners:
SFB61723.1
Protein of unknown function.
  
     0.751
SFB36368.1
Protein of unknown function.
 
     0.748
SFA97390.1
Protein of unknown function.
  
     0.727
SFB28198.1
Sugar phosphate isomerase/epimerase.
  
    0.715
SFB23695.1
Protein of unknown function.
  
     0.710
SFB61727.1
Protein of unknown function.
  
     0.663
SFB37207.1
Protein of unknown function.
 
     0.616
SFB46374.1
Starch-binding associating with outer membrane.
  
     0.562
SFB47036.1
Hypothetical protein.
       0.539
SFB48794.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.529
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.