Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA78215.1 | SFB47332.1 | SAMN04489723_101303 | SAMN04489723_11234 | Phosphoribosyl-ATP pyrophosphohydrolase. | Hypothetical protein. | 0.545 |
SFB09991.1 | SFB44355.1 | SAMN04489723_104194 | SAMN04489723_110123 | Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.781 |
SFB09991.1 | SFB47332.1 | SAMN04489723_104194 | SAMN04489723_11234 | Calcineurin-like phosphoesterase. | Hypothetical protein. | 0.601 |
SFB44355.1 | SFB09991.1 | SAMN04489723_110123 | SAMN04489723_104194 | Hypothetical protein. | Calcineurin-like phosphoesterase. | 0.781 |
SFB44355.1 | SFB47332.1 | SAMN04489723_110123 | SAMN04489723_11234 | Hypothetical protein. | Hypothetical protein. | 0.569 |
SFB47332.1 | SFA78215.1 | SAMN04489723_11234 | SAMN04489723_101303 | Hypothetical protein. | Phosphoribosyl-ATP pyrophosphohydrolase. | 0.545 |
SFB47332.1 | SFB09991.1 | SAMN04489723_11234 | SAMN04489723_104194 | Hypothetical protein. | Calcineurin-like phosphoesterase. | 0.601 |
SFB47332.1 | SFB44355.1 | SAMN04489723_11234 | SAMN04489723_110123 | Hypothetical protein. | Hypothetical protein. | 0.569 |
SFB47332.1 | SFB47338.1 | SAMN04489723_11234 | SAMN04489723_11235 | Hypothetical protein. | Putative lumazine-binding. | 0.781 |
SFB47332.1 | SFB47346.1 | SAMN04489723_11234 | SAMN04489723_11236 | Hypothetical protein. | Short-chain dehydrogenase. | 0.737 |
SFB47332.1 | SFB47354.1 | SAMN04489723_11234 | SAMN04489723_11237 | Hypothetical protein. | Mechanosensitive ion channel. | 0.533 |
SFB47332.1 | SFB56136.1 | SAMN04489723_11234 | SAMN04489723_12042 | Hypothetical protein. | DNA-directed RNA polymerase, subunit K/omega. | 0.822 |
SFB47332.1 | rpoA | SAMN04489723_11234 | SAMN04489723_10247 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
SFB47332.1 | rpoB | SAMN04489723_11234 | SAMN04489723_10280 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.828 |
SFB47332.1 | rpoC | SAMN04489723_11234 | SAMN04489723_10279 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.850 |
SFB47338.1 | SFB47332.1 | SAMN04489723_11235 | SAMN04489723_11234 | Putative lumazine-binding. | Hypothetical protein. | 0.781 |
SFB47338.1 | SFB47346.1 | SAMN04489723_11235 | SAMN04489723_11236 | Putative lumazine-binding. | Short-chain dehydrogenase. | 0.738 |
SFB47338.1 | SFB47354.1 | SAMN04489723_11235 | SAMN04489723_11237 | Putative lumazine-binding. | Mechanosensitive ion channel. | 0.533 |
SFB47346.1 | SFB47332.1 | SAMN04489723_11236 | SAMN04489723_11234 | Short-chain dehydrogenase. | Hypothetical protein. | 0.737 |
SFB47346.1 | SFB47338.1 | SAMN04489723_11236 | SAMN04489723_11235 | Short-chain dehydrogenase. | Putative lumazine-binding. | 0.738 |
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