Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA96950.1 | SFB47099.1 | SAMN04489723_10327 | SAMN04489723_1128 | Protein of unknown function. | Fucose permease. | 0.444 |
SFB15904.1 | SFB47099.1 | SAMN04489723_10513 | SAMN04489723_1128 | Tat (twin-arginine translocation) pathway signal sequence. | Fucose permease. | 0.618 |
SFB25301.1 | SFB26018.1 | SAMN04489723_106111 | SAMN04489723_106156 | Uncharacterized membrane protein. | Hypothetical protein. | 0.790 |
SFB25301.1 | SFB47099.1 | SAMN04489723_106111 | SAMN04489723_1128 | Uncharacterized membrane protein. | Fucose permease. | 0.433 |
SFB26018.1 | SFB25301.1 | SAMN04489723_106156 | SAMN04489723_106111 | Hypothetical protein. | Uncharacterized membrane protein. | 0.790 |
SFB26018.1 | SFB47099.1 | SAMN04489723_106156 | SAMN04489723_1128 | Hypothetical protein. | Fucose permease. | 0.447 |
SFB26018.1 | SFB56370.1 | SAMN04489723_106156 | SAMN04489723_12066 | Hypothetical protein. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.584 |
SFB26018.1 | SFB61299.1 | SAMN04489723_106156 | SAMN04489723_13314 | Hypothetical protein. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.575 |
SFB26345.1 | SFB42874.1 | SAMN04489723_106171 | SAMN04489723_1103 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Cytochrome c. | 0.857 |
SFB26345.1 | SFB47099.1 | SAMN04489723_106171 | SAMN04489723_1128 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Fucose permease. | 0.523 |
SFB26345.1 | SFB56370.1 | SAMN04489723_106171 | SAMN04489723_12066 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.881 |
SFB26345.1 | SFB61299.1 | SAMN04489723_106171 | SAMN04489723_13314 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.878 |
SFB42874.1 | SFB26345.1 | SAMN04489723_1103 | SAMN04489723_106171 | Cytochrome c. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.857 |
SFB42874.1 | SFB47099.1 | SAMN04489723_1103 | SAMN04489723_1128 | Cytochrome c. | Fucose permease. | 0.468 |
SFB42874.1 | SFB56370.1 | SAMN04489723_1103 | SAMN04489723_12066 | Cytochrome c. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.891 |
SFB42874.1 | SFB61299.1 | SAMN04489723_1103 | SAMN04489723_13314 | Cytochrome c. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.888 |
SFB44509.1 | SFB47099.1 | SAMN04489723_110138 | SAMN04489723_1128 | Protein of unknown function. | Fucose permease. | 0.437 |
SFB44509.1 | SFB56370.1 | SAMN04489723_110138 | SAMN04489723_12066 | Protein of unknown function. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.554 |
SFB44509.1 | SFB61299.1 | SAMN04489723_110138 | SAMN04489723_13314 | Protein of unknown function. | Putative membrane-bound dehydrogenase domain-containing protein. | 0.545 |
SFB47093.1 | SFB47099.1 | SAMN04489723_1127 | SAMN04489723_1128 | Hypothetical protein. | Fucose permease. | 0.508 |
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