STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB47099.1Fucose permease. (409 aa)    
Predicted Functional Partners:
SFB15904.1
Tat (twin-arginine translocation) pathway signal sequence.
  
     0.618
SFB26345.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
     0.523
SFB56370.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.510
SFB47093.1
Hypothetical protein.
       0.508
SFB61299.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
     0.489
SFB42874.1
Cytochrome c.
 
    0.468
SFB26018.1
Hypothetical protein.
  
     0.447
SFA96950.1
Protein of unknown function.
 
     0.444
SFB44509.1
Protein of unknown function.
  
     0.437
SFB25301.1
Uncharacterized membrane protein.
  
     0.433
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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