STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB48682.1NAD(P)-binding Rossmann-like domain-containing protein. (67 aa)    
Predicted Functional Partners:
SFB57959.1
Phytoene/squalene synthetase.
 
 
 0.821
SFB57915.1
Putative membrane protein.
 
  
 0.739
SFB48677.1
Hypothetical protein.
       0.543
SFA78127.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.520
SFB21385.1
Repeat domain-containing protein.
  
     0.457
SFA78939.1
Ligand-binding SRPBCC domain-containing protein.
 
     0.447
SFA91206.1
Zinc carboxypeptidase.
  
     0.444
SFB00888.1
Hypothetical protein.
  
     0.439
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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