STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB48996.1Hypothetical protein. (76 aa)    
Predicted Functional Partners:
SFB33520.1
Hypothetical protein.
  
     0.769
SFA75829.1
Hypothetical protein.
  
     0.757
SFA98813.1
Protein of unknown function.
  
     0.739
SFB47194.1
Biopolymer transport protein ExbD.
  
     0.737
SFB48980.1
Hypothetical protein.
 
     0.737
SFB51357.1
Hypothetical protein.
  
     0.709
SFB48926.1
Hypothetical protein.
  
     0.690
SFB47182.1
Biopolymer transport protein ExbD.
  
     0.682
SFB47203.1
Hypothetical protein.
  
     0.680
SFB49002.1
Phosphomannomutase.
       0.622
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.