STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB49223.1Glycosyltransferase involved in cell wall bisynthesis. (357 aa)    
Predicted Functional Partners:
SFB49208.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.894
SFB49215.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.780
SFB49258.1
Right handed beta helix region.
 
     0.706
SFA87227.1
Trehalose 6-phosphate synthase/phosphatase.
  
 0.634
SFB49231.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.629
SFB49251.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.625
SFB19828.1
1,4-alpha-glucan branching enzyme.
   
  0.598
SFB30191.1
CBS domain-containing protein.
  
 0.562
SFB49267.1
Rhamnosyltransferase.
 
    0.534
SFB49199.1
Polysaccharide pyruvyl transferase.
  
    0.487
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.