Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80499.1 | SFA98790.1 | SAMN04489723_101408 | SAMN04489723_103112 | Glutamate synthase (NADH) large subunit. | Allosteric NADP-dependent malic enzyme. | 0.469 |
SFA80499.1 | SFB49934.1 | SAMN04489723_101408 | SAMN04489723_11420 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.833 |
SFA98790.1 | SFA80499.1 | SAMN04489723_103112 | SAMN04489723_101408 | Allosteric NADP-dependent malic enzyme. | Glutamate synthase (NADH) large subunit. | 0.469 |
SFA98790.1 | SFB49934.1 | SAMN04489723_103112 | SAMN04489723_11420 | Allosteric NADP-dependent malic enzyme. | Hypothetical protein. | 0.838 |
SFB35584.1 | SFB35606.1 | SAMN04489723_1087 | SAMN04489723_1088 | RteC protein. | RteC protein. | 0.618 |
SFB35584.1 | SFB35893.1 | SAMN04489723_1087 | SAMN04489723_10829 | RteC protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.723 |
SFB35584.1 | SFB49927.1 | SAMN04489723_1087 | SAMN04489723_11419 | RteC protein. | Hypothetical protein. | 0.747 |
SFB35584.1 | SFB49934.1 | SAMN04489723_1087 | SAMN04489723_11420 | RteC protein. | Hypothetical protein. | 0.728 |
SFB35584.1 | SFB49941.1 | SAMN04489723_1087 | SAMN04489723_11421 | RteC protein. | Hypothetical protein. | 0.638 |
SFB35584.1 | SFB59389.1 | SAMN04489723_1087 | SAMN04489723_1264 | RteC protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.689 |
SFB35584.1 | SFB59730.1 | SAMN04489723_1087 | SAMN04489723_1272 | RteC protein. | Helix-turn-helix domain-containing protein. | 0.432 |
SFB35606.1 | SFB35584.1 | SAMN04489723_1088 | SAMN04489723_1087 | RteC protein. | RteC protein. | 0.618 |
SFB35606.1 | SFB35893.1 | SAMN04489723_1088 | SAMN04489723_10829 | RteC protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.712 |
SFB35606.1 | SFB49927.1 | SAMN04489723_1088 | SAMN04489723_11419 | RteC protein. | Hypothetical protein. | 0.738 |
SFB35606.1 | SFB49934.1 | SAMN04489723_1088 | SAMN04489723_11420 | RteC protein. | Hypothetical protein. | 0.708 |
SFB35606.1 | SFB49941.1 | SAMN04489723_1088 | SAMN04489723_11421 | RteC protein. | Hypothetical protein. | 0.613 |
SFB35606.1 | SFB59389.1 | SAMN04489723_1088 | SAMN04489723_1264 | RteC protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.676 |
SFB35893.1 | SFB35584.1 | SAMN04489723_10829 | SAMN04489723_1087 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | RteC protein. | 0.723 |
SFB35893.1 | SFB35606.1 | SAMN04489723_10829 | SAMN04489723_1088 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | RteC protein. | 0.712 |
SFB35893.1 | SFB49927.1 | SAMN04489723_10829 | SAMN04489723_11419 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.736 |
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