STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB51175.1Gliding motility-associated C-terminal domain-containing protein. (680 aa)    
Predicted Functional Partners:
SFB51170.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.932
SFB42874.1
Cytochrome c.
     
  0.781
SFB58782.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.683
SFB55361.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.676
SFB51180.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.670
SFA93436.1
OmpA family protein.
  
    0.669
SFB56370.1
Putative membrane-bound dehydrogenase domain-containing protein.
   
 
  0.624
SFB61299.1
Putative membrane-bound dehydrogenase domain-containing protein.
   
 
  0.624
SFB47056.1
Type IX secretion system membrane protein, PorP/SprF family.
 
     0.620
SFA91810.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.593
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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