Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA90380.1 | SFB17104.1 | SAMN04489723_102238 | SAMN04489723_10570 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | Hypothetical protein. | 0.451 |
SFA90380.1 | SFB47370.1 | SAMN04489723_102238 | SAMN04489723_11239 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | DNA polymerase III, alpha subunit. | 0.825 |
SFA90380.1 | SFB49119.1 | SAMN04489723_102238 | SAMN04489723_11377 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | DNA polymerase III, alpha subunit. | 0.479 |
SFA90380.1 | SFB51430.1 | SAMN04489723_102238 | SAMN04489723_11560 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | Protein of unknown function. | 0.655 |
SFA90380.1 | SFB57456.1 | SAMN04489723_102238 | SAMN04489723_12237 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | DNA polymerase-3 subunit delta'. | 0.451 |
SFA90380.1 | dnaX | SAMN04489723_102238 | SAMN04489723_10569 | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.451 |
SFB17104.1 | SFA90380.1 | SAMN04489723_10570 | SAMN04489723_102238 | Hypothetical protein. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.451 |
SFB17104.1 | SFB47370.1 | SAMN04489723_10570 | SAMN04489723_11239 | Hypothetical protein. | DNA polymerase III, alpha subunit. | 0.999 |
SFB17104.1 | SFB49119.1 | SAMN04489723_10570 | SAMN04489723_11377 | Hypothetical protein. | DNA polymerase III, alpha subunit. | 0.863 |
SFB17104.1 | SFB51430.1 | SAMN04489723_10570 | SAMN04489723_11560 | Hypothetical protein. | Protein of unknown function. | 0.677 |
SFB17104.1 | dnaX | SAMN04489723_10570 | SAMN04489723_10569 | Hypothetical protein. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.582 |
SFB47370.1 | SFA90380.1 | SAMN04489723_11239 | SAMN04489723_102238 | DNA polymerase III, alpha subunit. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.825 |
SFB47370.1 | SFB17104.1 | SAMN04489723_11239 | SAMN04489723_10570 | DNA polymerase III, alpha subunit. | Hypothetical protein. | 0.999 |
SFB47370.1 | SFB49119.1 | SAMN04489723_11239 | SAMN04489723_11377 | DNA polymerase III, alpha subunit. | DNA polymerase III, alpha subunit. | 0.840 |
SFB47370.1 | SFB51430.1 | SAMN04489723_11239 | SAMN04489723_11560 | DNA polymerase III, alpha subunit. | Protein of unknown function. | 0.885 |
SFB47370.1 | SFB57456.1 | SAMN04489723_11239 | SAMN04489723_12237 | DNA polymerase III, alpha subunit. | DNA polymerase-3 subunit delta'. | 0.999 |
SFB47370.1 | dnaX | SAMN04489723_11239 | SAMN04489723_10569 | DNA polymerase III, alpha subunit. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
SFB49119.1 | SFA90380.1 | SAMN04489723_11377 | SAMN04489723_102238 | DNA polymerase III, alpha subunit. | RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.479 |
SFB49119.1 | SFB17104.1 | SAMN04489723_11377 | SAMN04489723_10570 | DNA polymerase III, alpha subunit. | Hypothetical protein. | 0.863 |
SFB49119.1 | SFB47370.1 | SAMN04489723_11377 | SAMN04489723_11239 | DNA polymerase III, alpha subunit. | DNA polymerase III, alpha subunit. | 0.840 |
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