STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB52122.1Hypothetical protein. (444 aa)    
Predicted Functional Partners:
SFB59485.1
Hypothetical protein.
  
     0.754
SFB47067.1
C-terminal domain of CHU protein family protein.
  
     0.751
SFB59509.1
Putative ABC exporter.
  
     0.743
SFB47093.1
Hypothetical protein.
  
     0.729
SFB53164.1
Hypothetical protein.
  
     0.716
SFA74048.1
Protein of unknown function.
  
     0.714
SFA91419.1
Hypothetical protein.
  
     0.714
SFA93142.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.712
SFB61600.1
Protein of unknown function.
  
     0.710
SFA93032.1
Hypothetical protein.
  
     0.703
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.