Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA79912.1 | SFB53220.1 | SAMN04489723_101380 | SAMN04489723_11713 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | ATP-grasp domain-containing protein. | 0.836 |
SFA79912.1 | SFB53229.1 | SAMN04489723_101380 | SAMN04489723_11715 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Predicted hydrolase of the alpha/beta superfamily. | 0.692 |
SFA80876.1 | SFB17910.1 | SAMN04489723_101426 | SAMN04489723_105122 | Starch phosphorylase. | Alpha-amylase. | 0.761 |
SFA80876.1 | SFB53229.1 | SAMN04489723_101426 | SAMN04489723_11715 | Starch phosphorylase. | Predicted hydrolase of the alpha/beta superfamily. | 0.635 |
SFB17910.1 | SFA80876.1 | SAMN04489723_105122 | SAMN04489723_101426 | Alpha-amylase. | Starch phosphorylase. | 0.761 |
SFB17910.1 | SFB53229.1 | SAMN04489723_105122 | SAMN04489723_11715 | Alpha-amylase. | Predicted hydrolase of the alpha/beta superfamily. | 0.502 |
SFB33602.1 | SFB33620.1 | SAMN04489723_107217 | SAMN04489723_107218 | Hypothetical protein. | GMP synthase-Glutamine amidotransferase. | 0.950 |
SFB33602.1 | SFB33711.1 | SAMN04489723_107217 | SAMN04489723_107220 | Hypothetical protein. | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | 0.921 |
SFB33602.1 | SFB33730.1 | SAMN04489723_107217 | SAMN04489723_107221 | Hypothetical protein. | Esterase/lipase superfamily enzyme. | 0.891 |
SFB33602.1 | SFB53220.1 | SAMN04489723_107217 | SAMN04489723_11713 | Hypothetical protein. | ATP-grasp domain-containing protein. | 0.771 |
SFB33602.1 | SFB53225.1 | SAMN04489723_107217 | SAMN04489723_11714 | Hypothetical protein. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.591 |
SFB33602.1 | SFB53229.1 | SAMN04489723_107217 | SAMN04489723_11715 | Hypothetical protein. | Predicted hydrolase of the alpha/beta superfamily. | 0.733 |
SFB33620.1 | SFB33602.1 | SAMN04489723_107218 | SAMN04489723_107217 | GMP synthase-Glutamine amidotransferase. | Hypothetical protein. | 0.950 |
SFB33620.1 | SFB33711.1 | SAMN04489723_107218 | SAMN04489723_107220 | GMP synthase-Glutamine amidotransferase. | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | 0.909 |
SFB33620.1 | SFB33730.1 | SAMN04489723_107218 | SAMN04489723_107221 | GMP synthase-Glutamine amidotransferase. | Esterase/lipase superfamily enzyme. | 0.885 |
SFB33620.1 | SFB53220.1 | SAMN04489723_107218 | SAMN04489723_11713 | GMP synthase-Glutamine amidotransferase. | ATP-grasp domain-containing protein. | 0.771 |
SFB33620.1 | SFB53225.1 | SAMN04489723_107218 | SAMN04489723_11714 | GMP synthase-Glutamine amidotransferase. | Leucyl aminopeptidase; Belongs to the peptidase M17 family. | 0.462 |
SFB33620.1 | SFB53229.1 | SAMN04489723_107218 | SAMN04489723_11715 | GMP synthase-Glutamine amidotransferase. | Predicted hydrolase of the alpha/beta superfamily. | 0.731 |
SFB33711.1 | SFB33602.1 | SAMN04489723_107220 | SAMN04489723_107217 | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | Hypothetical protein. | 0.921 |
SFB33711.1 | SFB33620.1 | SAMN04489723_107220 | SAMN04489723_107218 | Glutathione synthase/RimK-type ligase, ATP-grasp superfamily. | GMP synthase-Glutamine amidotransferase. | 0.909 |
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