STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB53253.1Thioredoxin-like [2Fe-2S] ferredoxin. (80 aa)    
Predicted Functional Partners:
SFB20499.1
4Fe-4S dicluster domain-containing protein.
  
 0.999
SFB44537.1
Cytochrome b6-f complex iron-sulfur subunit.
   
 
 0.997
SFB51756.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.996
SFB38235.1
Deoxyadenosine/deoxycytidine kinase.
   
 0.955
SFA97136.1
Serine aminopeptidase, S33.
   
   0.944
SFB55171.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
   
 
 0.929
SFA79912.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
  0.921
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
  0.921
SFB06302.1
Acyl carrier protein.
   
  0.921
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.921
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.