STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB53392.1Hypothetical protein. (327 aa)    
Predicted Functional Partners:
SFA75190.1
Rhs element Vgr protein.
  
 
 0.997
SFB53434.1
Hypothetical protein.
  
   0.931
SFB53424.1
Hypothetical protein.
  
   0.904
SFB53386.1
Protein of unknown function.
   
 
 0.894
SFB53419.1
Hypothetical protein.
  
   0.873
SFB53439.1
Hypothetical protein.
  
 
 0.873
SFA75254.1
Hypothetical protein.
  
   0.848
SFB53449.1
Hypothetical protein.
   
 
 0.839
SFB53408.1
Conserved hypothetical phage tail region protein.
  
   0.791
SFB53403.1
Conserved hypothetical phage tail region protein.
  
   0.783
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.