STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB53403.1Conserved hypothetical phage tail region protein. (151 aa)    
Predicted Functional Partners:
SFA75190.1
Rhs element Vgr protein.
 
 
   0.997
SFB53419.1
Hypothetical protein.
 
   0.984
SFB53434.1
Hypothetical protein.
 
   0.984
SFB53439.1
Hypothetical protein.
 
 
 
 0.982
SFB53424.1
Hypothetical protein.
 
 
   0.979
SFB53449.1
Hypothetical protein.
 
 
   0.977
SFB53408.1
Conserved hypothetical phage tail region protein.
 
 
   0.970
SFB53386.1
Protein of unknown function.
 
 
   0.959
SFB53398.1
Hypothetical protein.
 
   0.959
SFA75281.1
Baseplate J-like protein.
 
 
 
 0.934
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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