Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA77076.1 | SFB02166.1 | SAMN04489723_101252 | SAMN04489723_103277 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Diaminopimelate decarboxylase. | 0.566 |
SFA77076.1 | SFB54168.1 | SAMN04489723_101252 | SAMN04489723_11845 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Ornithine cyclodeaminase. | 0.829 |
SFA77076.1 | lysA | SAMN04489723_101252 | SAMN04489723_11520 | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.566 |
SFB02166.1 | SFA77076.1 | SAMN04489723_103277 | SAMN04489723_101252 | Diaminopimelate decarboxylase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.566 |
SFB02166.1 | SFB54168.1 | SAMN04489723_103277 | SAMN04489723_11845 | Diaminopimelate decarboxylase. | Ornithine cyclodeaminase. | 0.532 |
SFB02166.1 | argH | SAMN04489723_103277 | SAMN04489723_104277 | Diaminopimelate decarboxylase. | Argininosuccinate lyase. | 0.516 |
SFB02166.1 | lysA | SAMN04489723_103277 | SAMN04489723_11520 | Diaminopimelate decarboxylase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.597 |
SFB44242.1 | SFB49144.1 | SAMN04489723_110111 | SAMN04489723_11384 | L-proline dehydrogenase. | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | 0.521 |
SFB44242.1 | SFB54168.1 | SAMN04489723_110111 | SAMN04489723_11845 | L-proline dehydrogenase. | Ornithine cyclodeaminase. | 0.610 |
SFB44242.1 | hutG | SAMN04489723_110111 | SAMN04489723_105197 | L-proline dehydrogenase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.455 |
SFB44242.1 | proC | SAMN04489723_110111 | SAMN04489723_12112 | L-proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.879 |
SFB49144.1 | SFB44242.1 | SAMN04489723_11384 | SAMN04489723_110111 | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | L-proline dehydrogenase. | 0.521 |
SFB49144.1 | SFB54168.1 | SAMN04489723_11384 | SAMN04489723_11845 | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | Ornithine cyclodeaminase. | 0.833 |
SFB49144.1 | proC | SAMN04489723_11384 | SAMN04489723_12112 | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.817 |
SFB54168.1 | SFA77076.1 | SAMN04489723_11845 | SAMN04489723_101252 | Ornithine cyclodeaminase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.829 |
SFB54168.1 | SFB02166.1 | SAMN04489723_11845 | SAMN04489723_103277 | Ornithine cyclodeaminase. | Diaminopimelate decarboxylase. | 0.532 |
SFB54168.1 | SFB44242.1 | SAMN04489723_11845 | SAMN04489723_110111 | Ornithine cyclodeaminase. | L-proline dehydrogenase. | 0.610 |
SFB54168.1 | SFB49144.1 | SAMN04489723_11845 | SAMN04489723_11384 | Ornithine cyclodeaminase. | 4-hydroxyproline epimerase; Belongs to the proline racemase family. | 0.833 |
SFB54168.1 | SFB59516.1 | SAMN04489723_11845 | SAMN04489723_12622 | Ornithine cyclodeaminase. | Cystathionine beta-synthase. | 0.533 |
SFB54168.1 | argH | SAMN04489723_11845 | SAMN04489723_104277 | Ornithine cyclodeaminase. | Argininosuccinate lyase. | 0.554 |
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