Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA89149.1 | SFA97480.1 | SAMN04489723_102188 | SAMN04489723_10349 | OmpA-OmpF porin, OOP family. | Outer membrane efflux protein. | 0.419 |
SFA89149.1 | SFB54929.1 | SAMN04489723_102188 | SAMN04489723_11913 | OmpA-OmpF porin, OOP family. | Iron complex outermembrane recepter protein. | 0.406 |
SFA97480.1 | SFA89149.1 | SAMN04489723_10349 | SAMN04489723_102188 | Outer membrane efflux protein. | OmpA-OmpF porin, OOP family. | 0.419 |
SFA97480.1 | SFB54929.1 | SAMN04489723_10349 | SAMN04489723_11913 | Outer membrane efflux protein. | Iron complex outermembrane recepter protein. | 0.551 |
SFA97480.1 | SFB58606.1 | SAMN04489723_10349 | SAMN04489723_12423 | Outer membrane efflux protein. | Outer membrane protein. | 0.838 |
SFB06591.1 | SFB54929.1 | SAMN04489723_10440 | SAMN04489723_11913 | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | Iron complex outermembrane recepter protein. | 0.589 |
SFB53973.1 | SFB54929.1 | SAMN04489723_11812 | SAMN04489723_11913 | Starch-binding associating with outer membrane. | Iron complex outermembrane recepter protein. | 0.474 |
SFB54929.1 | SFA89149.1 | SAMN04489723_11913 | SAMN04489723_102188 | Iron complex outermembrane recepter protein. | OmpA-OmpF porin, OOP family. | 0.406 |
SFB54929.1 | SFA97480.1 | SAMN04489723_11913 | SAMN04489723_10349 | Iron complex outermembrane recepter protein. | Outer membrane efflux protein. | 0.551 |
SFB54929.1 | SFB06591.1 | SAMN04489723_11913 | SAMN04489723_10440 | Iron complex outermembrane recepter protein. | Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family. | 0.589 |
SFB54929.1 | SFB53973.1 | SAMN04489723_11913 | SAMN04489723_11812 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.474 |
SFB54929.1 | SFB54936.1 | SAMN04489723_11913 | SAMN04489723_11914 | Iron complex outermembrane recepter protein. | Hypothetical protein. | 0.543 |
SFB54929.1 | SFB58606.1 | SAMN04489723_11913 | SAMN04489723_12423 | Iron complex outermembrane recepter protein. | Outer membrane protein. | 0.436 |
SFB54936.1 | SFB54929.1 | SAMN04489723_11914 | SAMN04489723_11913 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.543 |
SFB58606.1 | SFA97480.1 | SAMN04489723_12423 | SAMN04489723_10349 | Outer membrane protein. | Outer membrane efflux protein. | 0.838 |
SFB58606.1 | SFB54929.1 | SAMN04489723_12423 | SAMN04489723_11913 | Outer membrane protein. | Iron complex outermembrane recepter protein. | 0.436 |