Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80499.1 | SFB54983.1 | SAMN04489723_101408 | SAMN04489723_11920 | Glutamate synthase (NADH) large subunit. | Hypothetical protein. | 0.829 |
SFA80499.1 | SFB60451.1 | SAMN04489723_101408 | SAMN04489723_12920 | Glutamate synthase (NADH) large subunit. | Dissimilatory nitrite reductase (NO-forming), copper type apoprotein. | 0.847 |
SFA80499.1 | guaA | SAMN04489723_101408 | SAMN04489723_11048 | Glutamate synthase (NADH) large subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.913 |
SFA80499.1 | guaB | SAMN04489723_101408 | SAMN04489723_11542 | Glutamate synthase (NADH) large subunit. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.889 |
SFB54959.1 | SFB54968.1 | SAMN04489723_11917 | SAMN04489723_11918 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54959.1 | SFB54976.1 | SAMN04489723_11917 | SAMN04489723_11919 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54959.1 | SFB54983.1 | SAMN04489723_11917 | SAMN04489723_11920 | Hypothetical protein. | Hypothetical protein. | 0.781 |
SFB54959.1 | SFB54993.1 | SAMN04489723_11917 | SAMN04489723_11921 | Hypothetical protein. | Gluconate 2-dehydrogenase subunit 3. | 0.541 |
SFB54959.1 | SFB54999.1 | SAMN04489723_11917 | SAMN04489723_11922 | Hypothetical protein. | Choline dehydrogenase. | 0.541 |
SFB54968.1 | SFB54959.1 | SAMN04489723_11918 | SAMN04489723_11917 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54968.1 | SFB54976.1 | SAMN04489723_11918 | SAMN04489723_11919 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFB54968.1 | SFB54983.1 | SAMN04489723_11918 | SAMN04489723_11920 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54968.1 | SFB54993.1 | SAMN04489723_11918 | SAMN04489723_11921 | Hypothetical protein. | Gluconate 2-dehydrogenase subunit 3. | 0.541 |
SFB54968.1 | SFB54999.1 | SAMN04489723_11918 | SAMN04489723_11922 | Hypothetical protein. | Choline dehydrogenase. | 0.541 |
SFB54976.1 | SFB54959.1 | SAMN04489723_11919 | SAMN04489723_11917 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54976.1 | SFB54968.1 | SAMN04489723_11919 | SAMN04489723_11918 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFB54976.1 | SFB54983.1 | SAMN04489723_11919 | SAMN04489723_11920 | Hypothetical protein. | Hypothetical protein. | 0.777 |
SFB54976.1 | SFB54993.1 | SAMN04489723_11919 | SAMN04489723_11921 | Hypothetical protein. | Gluconate 2-dehydrogenase subunit 3. | 0.541 |
SFB54976.1 | SFB54999.1 | SAMN04489723_11919 | SAMN04489723_11922 | Hypothetical protein. | Choline dehydrogenase. | 0.541 |
SFB54983.1 | SFA80499.1 | SAMN04489723_11920 | SAMN04489723_101408 | Hypothetical protein. | Glutamate synthase (NADH) large subunit. | 0.829 |
page 1 of 3