STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB55129.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (297 aa)    
Predicted Functional Partners:
SFA72192.1
Uridine phosphorylase.
  
  
  0.621
SFB46236.1
Luciferase family oxidoreductase, group 1.
  
 
 0.572
SFB02665.1
Hypothetical protein.
 
 
  0.544
SFA97161.1
Catechol 2,3-dioxygenase.
 
  
  0.529
SFB55123.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
       0.520
SFB23885.1
Homogentisate 1,2-dioxygenase.
 
     0.501
SFB36003.1
Nicotinamidase/pyrazinamidase.
  
 
  0.472
SFA90565.1
NAD(P)H-dependent FMN reductase.
    
 0.465
SFB48722.1
Hypothetical protein.
  
 
 0.464
SFA77680.1
DNA-binding transcriptional regulator, MarR family.
 
  
  0.458
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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