Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80499.1 | SFA98262.1 | SAMN04489723_101408 | SAMN04489723_10387 | Glutamate synthase (NADH) large subunit. | PAS domain S-box-containing protein. | 0.519 |
SFA80499.1 | SFB41413.1 | SAMN04489723_101408 | SAMN04489723_109125 | Glutamate synthase (NADH) large subunit. | PAS domain S-box-containing protein. | 0.473 |
SFA80499.1 | SFB43933.1 | SAMN04489723_101408 | SAMN04489723_11089 | Glutamate synthase (NADH) large subunit. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.485 |
SFA80499.1 | SFB48950.1 | SAMN04489723_101408 | SAMN04489723_11350 | Glutamate synthase (NADH) large subunit. | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | 0.583 |
SFA80499.1 | SFB56499.1 | SAMN04489723_101408 | SAMN04489723_1216 | Glutamate synthase (NADH) large subunit. | Ligand-binding sensor domain-containing protein. | 0.841 |
SFA80499.1 | SFB57240.1 | SAMN04489723_101408 | SAMN04489723_12212 | Glutamate synthase (NADH) large subunit. | Ammonium transporter. | 0.711 |
SFA80499.1 | SFB58542.1 | SAMN04489723_101408 | SAMN04489723_12416 | Glutamate synthase (NADH) large subunit. | Signal transduction histidine kinase. | 0.841 |
SFA98262.1 | SFA80499.1 | SAMN04489723_10387 | SAMN04489723_101408 | PAS domain S-box-containing protein. | Glutamate synthase (NADH) large subunit. | 0.519 |
SFA98262.1 | SFB25548.1 | SAMN04489723_10387 | SAMN04489723_106128 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFA98262.1 | SFB26846.1 | SAMN04489723_10387 | SAMN04489723_106196 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFA98262.1 | SFB41413.1 | SAMN04489723_10387 | SAMN04489723_109125 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFA98262.1 | SFB43933.1 | SAMN04489723_10387 | SAMN04489723_11089 | PAS domain S-box-containing protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.999 |
SFA98262.1 | SFB48950.1 | SAMN04489723_10387 | SAMN04489723_11350 | PAS domain S-box-containing protein. | Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. | 0.854 |
SFA98262.1 | SFB56499.1 | SAMN04489723_10387 | SAMN04489723_1216 | PAS domain S-box-containing protein. | Ligand-binding sensor domain-containing protein. | 0.999 |
SFA98262.1 | SFB57240.1 | SAMN04489723_10387 | SAMN04489723_12212 | PAS domain S-box-containing protein. | Ammonium transporter. | 0.710 |
SFA98262.1 | SFB58542.1 | SAMN04489723_10387 | SAMN04489723_12416 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFB25548.1 | SFA98262.1 | SAMN04489723_106128 | SAMN04489723_10387 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SFB25548.1 | SFB26846.1 | SAMN04489723_106128 | SAMN04489723_106196 | Signal transduction histidine kinase. | Signal transduction histidine kinase. | 0.953 |
SFB25548.1 | SFB41413.1 | SAMN04489723_106128 | SAMN04489723_109125 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.999 |
SFB25548.1 | SFB43933.1 | SAMN04489723_106128 | SAMN04489723_11089 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.999 |
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