STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB58092.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SFB58087.1
Winged helix DNA-binding domain-containing protein.
 
     0.946
SFB58079.1
Inner membrane protein.
 
     0.822
SFB09991.1
Calcineurin-like phosphoesterase.
  
     0.673
SFA80185.1
Transglutaminase-like superfamily protein.
  
     0.654
SFA80244.1
Hypothetical protein.
  
     0.635
SFB09974.1
SdiA-regulated.
  
     0.590
SFA80222.1
Protein of unknown function.
  
     0.577
SFA80203.1
Protein of unknown function.
  
     0.576
SFB44355.1
Hypothetical protein.
  
     0.576
SFB09960.1
HD domain-containing protein.
  
     0.536
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.