STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB58497.1Repeat domain-containing protein. (1128 aa)    
Predicted Functional Partners:
SFB19928.1
PAP2 superfamily protein.
 
    0.775
SFA87206.1
PAP2 superfamily protein.
 
    0.774
SFA98262.1
PAS domain S-box-containing protein.
    
 0.761
SFB58515.1
SusD family protein.
 
     0.745
SFB58507.1
Hypothetical protein.
 
     0.729
SFB58528.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.677
SFB58486.1
Non-processive endocellulase.
 
     0.671
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.599
SFB12258.1
Protein of unknown function.
  
     0.583
SFB01377.1
Repeat domain-containing protein.
  
     0.556
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.