STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB58623.1Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (201 aa)    
Predicted Functional Partners:
SFB45936.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
    0.846
SFB58634.1
Uncharacterized conserved protein, DUF1015 family.
       0.791
SFB58643.1
propionyl-CoA carboxylase alpha chain.
       0.791
SFA93331.1
Dimerisation domain-containing protein.
 
 
    0.726
SFB18600.1
DNA replication and repair protein RadC; Belongs to the UPF0758 family.
 
  
 0.704
SFB60350.1
Tryptophan 2,3-dioxygenase apoenzyme.
    
   0.684
SFB55187.1
Putative hydrolases of HD superfamily.
 
      0.677
SFB50074.1
DNA repair protein RadC.
  
  
 0.666
SFB50464.1
DNA repair protein RadC.
  
  
 0.666
SFA72637.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.593
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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