Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA90976.1 | SFB31358.1 | SAMN04489723_102264 | SAMN04489723_10783 | WD40-like Beta Propeller Repeat. | Outer membrane protein OmpA. | 0.547 |
SFA90976.1 | SFB43672.1 | SAMN04489723_102264 | SAMN04489723_11067 | WD40-like Beta Propeller Repeat. | Outer membrane protein beta-barrel domain-containing protein. | 0.617 |
SFA90976.1 | SFB58886.1 | SAMN04489723_102264 | SAMN04489723_12518 | WD40-like Beta Propeller Repeat. | WD40-like Beta Propeller Repeat. | 0.924 |
SFA90976.1 | SFB59084.1 | SAMN04489723_102264 | SAMN04489723_12541 | WD40-like Beta Propeller Repeat. | Hypothetical protein. | 0.844 |
SFB31358.1 | SFA90976.1 | SAMN04489723_10783 | SAMN04489723_102264 | Outer membrane protein OmpA. | WD40-like Beta Propeller Repeat. | 0.547 |
SFB31358.1 | SFB43672.1 | SAMN04489723_10783 | SAMN04489723_11067 | Outer membrane protein OmpA. | Outer membrane protein beta-barrel domain-containing protein. | 0.726 |
SFB31358.1 | SFB47084.1 | SAMN04489723_10783 | SAMN04489723_1126 | Outer membrane protein OmpA. | C-terminal domain of CHU protein family protein. | 0.772 |
SFB31358.1 | SFB48870.1 | SAMN04489723_10783 | SAMN04489723_11332 | Outer membrane protein OmpA. | Hypothetical protein. | 0.544 |
SFB31358.1 | SFB58886.1 | SAMN04489723_10783 | SAMN04489723_12518 | Outer membrane protein OmpA. | WD40-like Beta Propeller Repeat. | 0.653 |
SFB31358.1 | SFB59084.1 | SAMN04489723_10783 | SAMN04489723_12541 | Outer membrane protein OmpA. | Hypothetical protein. | 0.651 |
SFB31358.1 | SFB60016.1 | SAMN04489723_10783 | SAMN04489723_12818 | Outer membrane protein OmpA. | Glycosyltransferase, GT2 family. | 0.637 |
SFB41936.1 | SFB47084.1 | SAMN04489723_109162 | SAMN04489723_1126 | N-acetylglutamate synthase, GNAT family. | C-terminal domain of CHU protein family protein. | 0.554 |
SFB41936.1 | SFB48870.1 | SAMN04489723_109162 | SAMN04489723_11332 | N-acetylglutamate synthase, GNAT family. | Hypothetical protein. | 0.487 |
SFB41936.1 | SFB59084.1 | SAMN04489723_109162 | SAMN04489723_12541 | N-acetylglutamate synthase, GNAT family. | Hypothetical protein. | 0.595 |
SFB41936.1 | SFB60016.1 | SAMN04489723_109162 | SAMN04489723_12818 | N-acetylglutamate synthase, GNAT family. | Glycosyltransferase, GT2 family. | 0.755 |
SFB43672.1 | SFA90976.1 | SAMN04489723_11067 | SAMN04489723_102264 | Outer membrane protein beta-barrel domain-containing protein. | WD40-like Beta Propeller Repeat. | 0.617 |
SFB43672.1 | SFB31358.1 | SAMN04489723_11067 | SAMN04489723_10783 | Outer membrane protein beta-barrel domain-containing protein. | Outer membrane protein OmpA. | 0.726 |
SFB43672.1 | SFB47084.1 | SAMN04489723_11067 | SAMN04489723_1126 | Outer membrane protein beta-barrel domain-containing protein. | C-terminal domain of CHU protein family protein. | 0.767 |
SFB43672.1 | SFB58886.1 | SAMN04489723_11067 | SAMN04489723_12518 | Outer membrane protein beta-barrel domain-containing protein. | WD40-like Beta Propeller Repeat. | 0.783 |
SFB43672.1 | SFB59084.1 | SAMN04489723_11067 | SAMN04489723_12541 | Outer membrane protein beta-barrel domain-containing protein. | Hypothetical protein. | 0.558 |
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