Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFA80499.1 | SFB58804.1 | SAMN04489723_101408 | SAMN04489723_1255 | Glutamate synthase (NADH) large subunit. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.892 |
| SFA80499.1 | purA | SAMN04489723_101408 | SAMN04489723_1253 | Glutamate synthase (NADH) large subunit. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.505 |
| SFA80499.1 | rpoB | SAMN04489723_101408 | SAMN04489723_10280 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.403 |
| SFA80499.1 | rpoC | SAMN04489723_101408 | SAMN04489723_10279 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.895 |
| SFB07487.1 | SFB58804.1 | SAMN04489723_10477 | SAMN04489723_1255 | Manganese/zinc/iron transport system permease protein. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.707 |
| SFB07487.1 | rpoB | SAMN04489723_10477 | SAMN04489723_10280 | Manganese/zinc/iron transport system permease protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.410 |
| SFB08200.1 | SFB56136.1 | SAMN04489723_104108 | SAMN04489723_12042 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase, subunit K/omega. | 0.992 |
| SFB08200.1 | SFB58804.1 | SAMN04489723_104108 | SAMN04489723_1255 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.583 |
| SFB08200.1 | rpoA | SAMN04489723_104108 | SAMN04489723_10247 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| SFB08200.1 | rpoB | SAMN04489723_104108 | SAMN04489723_10280 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| SFB08200.1 | rpoC | SAMN04489723_104108 | SAMN04489723_10279 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| SFB56136.1 | SFB08200.1 | SAMN04489723_12042 | SAMN04489723_104108 | DNA-directed RNA polymerase, subunit K/omega. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.992 |
| SFB56136.1 | SFB58804.1 | SAMN04489723_12042 | SAMN04489723_1255 | DNA-directed RNA polymerase, subunit K/omega. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.497 |
| SFB56136.1 | rpoA | SAMN04489723_12042 | SAMN04489723_10247 | DNA-directed RNA polymerase, subunit K/omega. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFB56136.1 | rpoB | SAMN04489723_12042 | SAMN04489723_10280 | DNA-directed RNA polymerase, subunit K/omega. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFB56136.1 | rpoC | SAMN04489723_12042 | SAMN04489723_10279 | DNA-directed RNA polymerase, subunit K/omega. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| SFB58798.1 | SFB58804.1 | SAMN04489723_1254 | SAMN04489723_1255 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.791 |
| SFB58798.1 | SFB58810.1 | SAMN04489723_1254 | SAMN04489723_1256 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.638 |
| SFB58798.1 | purA | SAMN04489723_1254 | SAMN04489723_1253 | Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.520 |
| SFB58804.1 | SFA80499.1 | SAMN04489723_1255 | SAMN04489723_101408 | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | Glutamate synthase (NADH) large subunit. | 0.892 |
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