Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA80601.1 | SFB19138.1 | SAMN04489723_101413 | SAMN04489723_105184 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.756 |
SFA80601.1 | SFB54860.1 | SAMN04489723_101413 | SAMN04489723_1192 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.751 |
SFA80601.1 | SFB59626.1 | SAMN04489723_101413 | SAMN04489723_12641 | Tetratricopeptide repeat-containing protein. | Caa(3)-type oxidase, subunit IV. | 0.740 |
SFB19138.1 | SFA80601.1 | SAMN04489723_105184 | SAMN04489723_101413 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.756 |
SFB19138.1 | SFB54860.1 | SAMN04489723_105184 | SAMN04489723_1192 | Hypothetical protein. | Hypothetical protein. | 0.769 |
SFB19138.1 | SFB59626.1 | SAMN04489723_105184 | SAMN04489723_12641 | Hypothetical protein. | Caa(3)-type oxidase, subunit IV. | 0.751 |
SFB52900.1 | SFB59589.1 | SAMN04489723_11688 | SAMN04489723_12635 | Cytochrome c oxidase cbb3-type subunit 3. | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.915 |
SFB52900.1 | SFB59594.1 | SAMN04489723_11688 | SAMN04489723_12636 | Cytochrome c oxidase cbb3-type subunit 3. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.915 |
SFB52900.1 | SFB59613.1 | SAMN04489723_11688 | SAMN04489723_12639 | Cytochrome c oxidase cbb3-type subunit 3. | Cytochrome c oxidase subunit 3. | 0.903 |
SFB52900.1 | SFB59620.1 | SAMN04489723_11688 | SAMN04489723_12640 | Cytochrome c oxidase cbb3-type subunit 3. | Cytochrome c oxidase subunit 3. | 0.903 |
SFB52900.1 | SFB59626.1 | SAMN04489723_11688 | SAMN04489723_12641 | Cytochrome c oxidase cbb3-type subunit 3. | Caa(3)-type oxidase, subunit IV. | 0.810 |
SFB52900.1 | ctaB | SAMN04489723_11688 | SAMN04489723_12638 | Cytochrome c oxidase cbb3-type subunit 3. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.785 |
SFB54860.1 | SFA80601.1 | SAMN04489723_1192 | SAMN04489723_101413 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.751 |
SFB54860.1 | SFB19138.1 | SAMN04489723_1192 | SAMN04489723_105184 | Hypothetical protein. | Hypothetical protein. | 0.769 |
SFB54860.1 | SFB59626.1 | SAMN04489723_1192 | SAMN04489723_12641 | Hypothetical protein. | Caa(3)-type oxidase, subunit IV. | 0.724 |
SFB59589.1 | SFB52900.1 | SAMN04489723_12635 | SAMN04489723_11688 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase cbb3-type subunit 3. | 0.915 |
SFB59589.1 | SFB59594.1 | SAMN04489723_12635 | SAMN04489723_12636 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
SFB59589.1 | SFB59600.1 | SAMN04489723_12635 | SAMN04489723_12637 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase assembly protein subunit 15. | 0.922 |
SFB59589.1 | SFB59613.1 | SAMN04489723_12635 | SAMN04489723_12639 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 3. | 0.999 |
SFB59589.1 | SFB59620.1 | SAMN04489723_12635 | SAMN04489723_12640 | Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | Cytochrome c oxidase subunit 3. | 0.999 |
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