STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB59988.1Glycosyltransferase involved in cell wall bisynthesis. (361 aa)    
Predicted Functional Partners:
SFB60016.1
Glycosyltransferase, GT2 family.
 
    0.906
SFB60003.1
Glycosyltransferase involved in cell wall bisynthesis.
    
0.899
SFB60023.1
Glycosyltransferase, GT2 family.
 
    0.827
SFB60010.1
Hypothetical protein.
 
     0.818
SFB59995.1
Hypothetical protein.
 
     0.811
SFB59962.1
Hypothetical protein.
  
     0.736
SFB60036.1
Glycosyl transferase family 2.
 
    0.716
SFB41936.1
N-acetylglutamate synthase, GNAT family.
  
     0.705
SFB60041.1
Glycosyl transferase family 2.
  
    0.662
SFB60029.1
Glycosyltransferase WbsX.
  
    0.656
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.