STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB60110.1Methyltransferase, FkbM family. (271 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.840
SFB60103.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.718
SFB60052.1
Methyltransferase domain-containing protein.
  
 
 0.698
SFB60074.1
Lipopolysaccharide transport system ATP-binding protein.
 
     0.679
SFB60088.1
Methyltransferase domain-containing protein.
 
   
 0.653
SFB60059.1
Glycosyl transferase family 11.
 
     0.643
SFB60068.1
Methyltransferase domain-containing protein.
    
  0.627
SFB60080.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.593
SFB60096.1
GtrA-like protein.
       0.593
SFA78127.1
Betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.541
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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