STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB60919.1Hypothetical protein. (862 aa)    
Predicted Functional Partners:
SFB60903.1
Starch-binding associating with outer membrane.
 
 
   0.904
SFB60915.1
2-polyprenyl-6-methoxyphenol hydroxylase.
 
     0.867
SFB60924.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
 
     0.831
SFB60909.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.824
SFB55888.1
Tat (twin-arginine translocation) pathway signal sequence; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  0.814
SFB27388.1
Starch-binding associating with outer membrane.
  
 
   0.809
SFB60897.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.793
SFB60928.1
N-terminal ig-like domain of cellulase.
       0.788
SFA99166.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
  0.773
SFB24381.1
Hypothetical protein.
   
  0.773
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.