Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB19217.1 | SFB43992.1 | SAMN04489723_105188 | SAMN04489723_11093 | Protein of unknown function. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.756 |
SFB19217.1 | SFB61002.1 | SAMN04489723_105188 | SAMN04489723_1321 | Protein of unknown function. | IS4 transposase. | 0.491 |
SFB43992.1 | SFB19217.1 | SAMN04489723_11093 | SAMN04489723_105188 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Protein of unknown function. | 0.756 |
SFB43992.1 | SFB52653.1 | SAMN04489723_11093 | SAMN04489723_11661 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Superfamily I DNA and/or RNA helicase. | 0.713 |
SFB43992.1 | SFB59738.1 | SAMN04489723_11093 | SAMN04489723_1274 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | Uncharacterized protein. | 0.668 |
SFB43992.1 | SFB61002.1 | SAMN04489723_11093 | SAMN04489723_1321 | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | IS4 transposase. | 0.694 |
SFB50689.1 | SFB50698.1 | SAMN04489723_11495 | SAMN04489723_11496 | Hypothetical protein. | Predicted nucleotidyltransferase component of viral defense system. | 0.958 |
SFB50689.1 | SFB61002.1 | SAMN04489723_11495 | SAMN04489723_1321 | Hypothetical protein. | IS4 transposase. | 0.512 |
SFB50698.1 | SFB50689.1 | SAMN04489723_11496 | SAMN04489723_11495 | Predicted nucleotidyltransferase component of viral defense system. | Hypothetical protein. | 0.958 |
SFB50698.1 | SFB61002.1 | SAMN04489723_11496 | SAMN04489723_1321 | Predicted nucleotidyltransferase component of viral defense system. | IS4 transposase. | 0.407 |
SFB51774.1 | SFB61002.1 | SAMN04489723_115104 | SAMN04489723_1321 | ISXO2-like transposase domain-containing protein. | IS4 transposase. | 0.411 |
SFB52653.1 | SFB43992.1 | SAMN04489723_11661 | SAMN04489723_11093 | Superfamily I DNA and/or RNA helicase. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.713 |
SFB52653.1 | SFB61002.1 | SAMN04489723_11661 | SAMN04489723_1321 | Superfamily I DNA and/or RNA helicase. | IS4 transposase. | 0.491 |
SFB55388.1 | SFB61002.1 | SAMN04489723_11988 | SAMN04489723_1321 | ISXO2-like transposase domain-containing protein. | IS4 transposase. | 0.405 |
SFB59738.1 | SFB43992.1 | SAMN04489723_1274 | SAMN04489723_11093 | Uncharacterized protein. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.668 |
SFB59738.1 | SFB61002.1 | SAMN04489723_1274 | SAMN04489723_1321 | Uncharacterized protein. | IS4 transposase. | 0.494 |
SFB61002.1 | SFB19217.1 | SAMN04489723_1321 | SAMN04489723_105188 | IS4 transposase. | Protein of unknown function. | 0.491 |
SFB61002.1 | SFB43992.1 | SAMN04489723_1321 | SAMN04489723_11093 | IS4 transposase. | Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains. | 0.694 |
SFB61002.1 | SFB50689.1 | SAMN04489723_1321 | SAMN04489723_11495 | IS4 transposase. | Hypothetical protein. | 0.512 |
SFB61002.1 | SFB50698.1 | SAMN04489723_1321 | SAMN04489723_11496 | IS4 transposase. | Predicted nucleotidyltransferase component of viral defense system. | 0.407 |
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