STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB61666.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
SFB61655.1
Leucine-rich repeat (LRR) protein.
 
     0.950
SFB61660.1
Hypothetical protein.
 
     0.950
SFB61671.1
Hypothetical protein.
       0.713
SFA86152.1
Hypothetical protein.
  
     0.706
SFB53259.1
Hypothetical protein.
  
     0.696
SFB02608.1
Hypothetical protein.
  
     0.690
SFB48963.1
Oxygen tolerance.
  
     0.670
SFB47635.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.664
SFB47119.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.628
SFB56164.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.628
Your Current Organism:
Algoriphagus aquimarinus
NCBI taxonomy Id: 237018
Other names: A. aquimarinus, Algoriphagus aquimarinus Nedashkovskaya et al. 2004, CCUG 47101, DSM 23399, KMM 3958, LMG 21971, LMG:21971
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.