STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN85089.15-carboxymethyl-2-hydroxymuconate isomerase. (128 aa)    
Predicted Functional Partners:
SDN85059.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
 
 0.925
SDN85025.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
 
 0.911
SDN84966.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase.
 
     0.864
SDN84882.1
4-hydroxyphenylacetate 3-monooxygenase.
 
  
 0.812
SDN85121.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.767
SDN84938.1
5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.765
SDN85176.1
Sugar diacid utilization regulator.
 
     0.690
dapA
4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
     0.678
SDN85207.1
4-hydroxyphenylacetate 3-monooxygenase.
 
  
 0.647
SDN85294.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.602
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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