STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN85294.1TRAP-type C4-dicarboxylate transport system, small permease component. (162 aa)    
Predicted Functional Partners:
SDN85324.1
TRAP transporter, DctM subunit.
 
  0.962
SDN85265.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
    0.940
SDN85348.1
DNA-binding transcriptional regulator, GntR family.
       0.603
SDN85089.1
5-carboxymethyl-2-hydroxymuconate isomerase.
 
     0.602
SDM88808.1
TRAP transporter, DctM subunit.
  
  0.502
SDN50954.1
C4-dicarboxylate transporter, DctM subunit.
  
  0.502
SDN51951.1
TRAP transporter, DctM subunit.
  
  0.502
SDN52243.1
C4-dicarboxylate transporter, DctM subunit.
  
  0.484
SDN80520.1
YtoQ family protein.
  
     0.484
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.