Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM78491.1 | SDN85540.1 | SAMN05216498_0574 | SAMN05216498_0054 | Lysine decarboxylase. | Spermidine synthase. | 0.691 |
SDM78491.1 | SDN93093.1 | SAMN05216498_0574 | SAMN05216498_0220 | Lysine decarboxylase. | Arginase; Belongs to the arginase family. | 0.866 |
SDM78491.1 | rocD | SAMN05216498_0574 | SAMN05216498_1906 | Lysine decarboxylase. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.585 |
SDM81677.1 | SDN52539.1 | SAMN05216498_0672 | SAMN05216498_2499 | Diaminobutyrate-2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.811 |
SDM81677.1 | SDN93093.1 | SAMN05216498_0672 | SAMN05216498_0220 | Diaminobutyrate-2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Arginase; Belongs to the arginase family. | 0.719 |
SDM81677.1 | rocD | SAMN05216498_0672 | SAMN05216498_1906 | Diaminobutyrate-2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.612 |
SDN52539.1 | SDM81677.1 | SAMN05216498_2499 | SAMN05216498_0672 | Glutamate synthase (NADPH/NADH) large chain. | Diaminobutyrate-2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.811 |
SDN52539.1 | SDN67433.1 | SAMN05216498_2499 | SAMN05216498_2799 | Glutamate synthase (NADPH/NADH) large chain. | Proline dehydrogenase. | 0.733 |
SDN52539.1 | SDN93093.1 | SAMN05216498_2499 | SAMN05216498_0220 | Glutamate synthase (NADPH/NADH) large chain. | Arginase; Belongs to the arginase family. | 0.705 |
SDN52539.1 | fumC | SAMN05216498_2499 | SAMN05216498_0110 | Glutamate synthase (NADPH/NADH) large chain. | Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.488 |
SDN52539.1 | rocD | SAMN05216498_2499 | SAMN05216498_1906 | Glutamate synthase (NADPH/NADH) large chain. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.511 |
SDN67433.1 | SDN52539.1 | SAMN05216498_2799 | SAMN05216498_2499 | Proline dehydrogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.733 |
SDN67433.1 | SDN93093.1 | SAMN05216498_2799 | SAMN05216498_0220 | Proline dehydrogenase. | Arginase; Belongs to the arginase family. | 0.699 |
SDN67433.1 | rocD | SAMN05216498_2799 | SAMN05216498_1906 | Proline dehydrogenase. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.681 |
SDN85540.1 | SDM78491.1 | SAMN05216498_0054 | SAMN05216498_0574 | Spermidine synthase. | Lysine decarboxylase. | 0.691 |
SDN85540.1 | SDN93093.1 | SAMN05216498_0054 | SAMN05216498_0220 | Spermidine synthase. | Arginase; Belongs to the arginase family. | 0.617 |
SDN85540.1 | rocD | SAMN05216498_0054 | SAMN05216498_1906 | Spermidine synthase. | Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. | 0.566 |
SDN93093.1 | SDM78491.1 | SAMN05216498_0220 | SAMN05216498_0574 | Arginase; Belongs to the arginase family. | Lysine decarboxylase. | 0.866 |
SDN93093.1 | SDM81677.1 | SAMN05216498_0220 | SAMN05216498_0672 | Arginase; Belongs to the arginase family. | Diaminobutyrate-2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.719 |
SDN93093.1 | SDN52539.1 | SAMN05216498_0220 | SAMN05216498_2499 | Arginase; Belongs to the arginase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.705 |
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