STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN93955.1Alanine racemase. (329 aa)    
Predicted Functional Partners:
SDN52539.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.883
SDN94143.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.843
SDN94079.1
Ribose transport system substrate-binding protein.
 
 
 0.835
SDN93989.1
Predicted dehydrogenase.
 
   
 0.794
SDN69851.1
Catabolite repression HPr-like protein.
   
 
 0.762
SDN94113.1
Ribose transport system ATP-binding protein.
 
 
 0.750
SDN24750.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.688
SDN94018.1
Sugar phosphate isomerase/epimerase.
 
    0.621
SDN93928.1
Sugar phosphate isomerase/epimerase.
 
    0.596
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.584
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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