STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN94113.1Ribose transport system ATP-binding protein. (505 aa)    
Predicted Functional Partners:
SDN94143.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.999
SDN94079.1
Ribose transport system substrate-binding protein.
 
 0.998
SDO00983.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   
 0.933
SDN00270.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.868
SDN00242.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.859
SDN26078.1
Transcriptional activator of comK gene.
 
  
  0.776
SDN00324.1
Basic membrane protein A.
  
  0.766
SDN93955.1
Alanine racemase.
 
 
 0.750
SDN34126.1
Pseudouridine kinase.
 
  
 0.677
SDN94046.1
Predicted dehydrogenase.
 
  
 0.624
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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