STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN95019.1Predicted kinase, aminoglycoside phosphotransferase (APT) family. (294 aa)    
Predicted Functional Partners:
SDN95061.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.729
SDN94991.1
Hypothetical protein.
       0.723
SDN67411.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.589
SDN95089.1
Hypothetical protein.
       0.561
SDN38933.1
Protein N-acetyltransferase, RimJ/RimL family.
  
 
   0.512
SDM85093.1
Hypothetical protein.
 
  0.499
SDO00770.1
Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
  
  
  0.479
SDN22671.1
Uncharacterized protein YuzB, UPF0349 family.
  
     0.464
SDN94958.1
4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
       0.462
SDM83342.1
Ribosomal-protein-alanine N-acetyltransferase.
 
 
   0.454
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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