STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN99961.1Type IV pilus assembly protein PilM. (320 aa)    
Predicted Functional Partners:
SDN99933.1
Tfp pilus assembly protein PilN.
  
 0.996
SDO00045.1
Type IV pilus assembly protein PilC.
 
 
 
 0.940
SDO00015.1
Type IV pilus assembly protein PilA.
 
     0.937
SDO00075.1
Type IV pilus assembly protein PilB.
 
 
 
 0.905
SDN99984.1
Leader peptidase (prepilin peptidase) / N-methyltransferase.
 
  
 0.872
SDN99907.1
Hypothetical protein.
       0.773
SDM91810.1
Competence protein ComK.
  
     0.669
SDN17898.1
Competence protein ComGA.
 
 
 
 0.625
SDM84640.1
Superfamily I DNA and RNA helicases.
  
     0.597
SDN22614.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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