STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO00801.1ABC-2 type transport system permease protein. (258 aa)    
Predicted Functional Partners:
SDO00828.1
ABC-2 type transport system ATP-binding protein.
 
     0.952
SDN99872.1
ABC-2 type transport system permease protein.
 
  0.672
SDN80358.1
PH domain-containing protein.
  
    0.530
SDN94577.1
Predicted arabinose efflux permease, MFS family.
  
     0.524
SDN50117.1
iron(III) transport system permease protein.
 
  
  0.520
SDN04483.1
Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
  
     0.513
SDN94605.1
Transcriptional regulatory protein, C terminal.
  
     0.503
SDM82567.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.501
SDM81243.1
ABC-2 type transport system permease protein.
  
 
  0.490
SDN93736.1
ABC-2 family transporter protein.
   
  0.486
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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