Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM81881.1 | SDM81929.1 | SAMN05216498_0679 | SAMN05216498_0681 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.869 |
SDM81881.1 | murE | SAMN05216498_0679 | SAMN05216498_0680 | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.648 |
SDM81929.1 | SDM81881.1 | SAMN05216498_0681 | SAMN05216498_0679 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.869 |
SDM81929.1 | SDM81957.1 | SAMN05216498_0681 | SAMN05216498_0682 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Hypothetical protein. | 0.427 |
SDM81929.1 | SDN08972.1 | SAMN05216498_0681 | SAMN05216498_1425 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains. | 0.462 |
SDM81929.1 | carB | SAMN05216498_0681 | SAMN05216498_1237 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.597 |
SDM81929.1 | murE | SAMN05216498_0681 | SAMN05216498_0680 | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.765 |
SDM81957.1 | SDM81929.1 | SAMN05216498_0682 | SAMN05216498_0681 | Hypothetical protein. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.427 |
SDN08972.1 | SDM81929.1 | SAMN05216498_1425 | SAMN05216498_0681 | Uncharacterized conserved protein, contains ParB-like and HNH nuclease domains. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.462 |
carB | SDM81929.1 | SAMN05216498_1237 | SAMN05216498_0681 | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.597 |
murE | SDM81881.1 | SAMN05216498_0680 | SAMN05216498_0679 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | Aspartate racemase; Belongs to the aspartate/glutamate racemases family. | 0.648 |
murE | SDM81929.1 | SAMN05216498_0680 | SAMN05216498_0681 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | Predicted ATP-dependent carboligase, ATP-grasp superfamily. | 0.765 |