Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM82917.1 | SDM82949.1 | SAMN05216498_0715 | SAMN05216498_0716 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Hypothetical protein. | 0.906 |
SDM82917.1 | SDN24750.1 | SAMN05216498_0715 | SAMN05216498_1845 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.749 |
SDM82917.1 | SDN41036.1 | SAMN05216498_0715 | SAMN05216498_2232 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glyoxalase family protein. | 0.564 |
SDM82917.1 | SDN52539.1 | SAMN05216498_0715 | SAMN05216498_2499 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.804 |
SDM82917.1 | SDN67411.1 | SAMN05216498_0715 | SAMN05216498_2798 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.627 |
SDM82917.1 | SDN67433.1 | SAMN05216498_0715 | SAMN05216498_2799 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Proline dehydrogenase. | 0.934 |
SDM82917.1 | SDO01199.1 | SAMN05216498_0715 | SAMN05216498_0453 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glycine/D-amino acid oxidase. | 0.620 |
SDM82917.1 | deoC | SAMN05216498_0715 | SAMN05216498_1656 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.554 |
SDM82917.1 | fmt | SAMN05216498_0715 | SAMN05216498_1220 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.756 |
SDM82917.1 | icmF | SAMN05216498_0715 | SAMN05216498_0961 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.668 |
SDM82949.1 | SDM82917.1 | SAMN05216498_0716 | SAMN05216498_0715 | Hypothetical protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.906 |
SDN24750.1 | SDM82917.1 | SAMN05216498_1845 | SAMN05216498_0715 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.749 |
SDN24750.1 | SDN52539.1 | SAMN05216498_1845 | SAMN05216498_2499 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.553 |
SDN24750.1 | SDN67411.1 | SAMN05216498_1845 | SAMN05216498_2798 | Pyruvate kinase; Belongs to the pyruvate kinase family. | 3-hydroxyacyl-CoA dehydrogenase. | 0.404 |
SDN24750.1 | SDO01199.1 | SAMN05216498_1845 | SAMN05216498_0453 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glycine/D-amino acid oxidase. | 0.472 |
SDN24750.1 | deoC | SAMN05216498_1845 | SAMN05216498_1656 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.738 |
SDN41036.1 | SDM82917.1 | SAMN05216498_2232 | SAMN05216498_0715 | Glyoxalase family protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.564 |
SDN41036.1 | SDN52539.1 | SAMN05216498_2232 | SAMN05216498_2499 | Glyoxalase family protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.618 |
SDN41036.1 | icmF | SAMN05216498_2232 | SAMN05216498_0961 | Glyoxalase family protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.840 |
SDN52539.1 | SDM82917.1 | SAMN05216498_2499 | SAMN05216498_0715 | Glutamate synthase (NADPH/NADH) large chain. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.804 |
page 1 of 3