STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM83812.1Pilus assembly protein CpaB. (251 aa)    
Predicted Functional Partners:
SDM83846.1
Pilus assembly protein CpaE.
  
  
 0.910
SDM83931.1
Tight adherence protein C.
  
  
 0.861
SDM83913.1
Tight adherence protein B.
  
  
 0.851
SDM83881.1
Pilus assembly protein CpaF.
  
  
 0.786
SDM86454.1
Tight adherence protein C.
  
  
 0.723
SDM86214.1
Pilus assembly protein Flp/PilA.
  
  
 0.707
SDM86362.1
Pilus assembly protein CpaE.
  
  
 0.692
SDM86242.1
Prepilin peptidase CpaA.
  
  
 0.689
SDM84110.1
TadE-like protein.
  
    0.682
SDM83964.1
Hypothetical protein.
       0.639
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.