Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDM87303.1 | SDN07084.1 | SAMN05216498_0869 | SAMN05216498_1350 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Aminotransferase. | 0.413 |
SDM87303.1 | SDN26263.1 | SAMN05216498_0869 | SAMN05216498_1889 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Protein of unknown function; Belongs to the UPF0311 family. | 0.521 |
SDM87303.1 | kynA | SAMN05216498_0869 | SAMN05216498_0870 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.522 |
SDM87303.1 | trpA | SAMN05216498_0869 | SAMN05216498_2145 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.568 |
SDN07084.1 | SDM87303.1 | SAMN05216498_1350 | SAMN05216498_0869 | Aminotransferase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.413 |
SDN07084.1 | SDN10989.1 | SAMN05216498_1350 | SAMN05216498_1502 | Aminotransferase. | Acetyl esterase. | 0.469 |
SDN07084.1 | SDN26263.1 | SAMN05216498_1350 | SAMN05216498_1889 | Aminotransferase. | Protein of unknown function; Belongs to the UPF0311 family. | 0.476 |
SDN07084.1 | kynA | SAMN05216498_1350 | SAMN05216498_0870 | Aminotransferase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.459 |
SDN07084.1 | kynU | SAMN05216498_1350 | SAMN05216498_0872 | Aminotransferase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.498 |
SDN07084.1 | trpA | SAMN05216498_1350 | SAMN05216498_2145 | Aminotransferase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.457 |
SDN09437.1 | SDN10989.1 | SAMN05216498_1446 | SAMN05216498_1502 | Kynurenine formamidase. | Acetyl esterase. | 0.566 |
SDN09437.1 | SDN26263.1 | SAMN05216498_1446 | SAMN05216498_1889 | Kynurenine formamidase. | Protein of unknown function; Belongs to the UPF0311 family. | 0.597 |
SDN09437.1 | SDN66879.1 | SAMN05216498_1446 | SAMN05216498_2778 | Kynurenine formamidase. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.506 |
SDN09437.1 | kynA | SAMN05216498_1446 | SAMN05216498_0870 | Kynurenine formamidase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.832 |
SDN09437.1 | kynU | SAMN05216498_1446 | SAMN05216498_0872 | Kynurenine formamidase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.891 |
SDN10989.1 | SDN07084.1 | SAMN05216498_1502 | SAMN05216498_1350 | Acetyl esterase. | Aminotransferase. | 0.469 |
SDN10989.1 | SDN09437.1 | SAMN05216498_1502 | SAMN05216498_1446 | Acetyl esterase. | Kynurenine formamidase. | 0.566 |
SDN10989.1 | SDN26263.1 | SAMN05216498_1502 | SAMN05216498_1889 | Acetyl esterase. | Protein of unknown function; Belongs to the UPF0311 family. | 0.757 |
SDN10989.1 | SDN66879.1 | SAMN05216498_1502 | SAMN05216498_2778 | Acetyl esterase. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.567 |
SDN10989.1 | kynA | SAMN05216498_1502 | SAMN05216498_0870 | Acetyl esterase. | Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. | 0.687 |
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