SDM87468.1 protein (Tenuibacillus multivorans)

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Predicted Interactions

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SDM87468.1

PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (834 aa)

Predicted Functional Partners:

SDN38167.1

0.986

SDN67577.1

0.969

SDN07331.1

0.968

SDN61607.1

0.964

SDN22159.1

0.942

SDN38824.1

0.927

SDM83720.1

0.925

SDN37027.1

0.925

SDN51759.1

0.925

SDN59774.1

0.925

Your Current Organism:

Tenuibacillus multivorans

NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDM83720.1	SDM87468.1	SAMN05216498_0746	SAMN05216498_0874	Diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.925
SDM83720.1	SDN07331.1	SAMN05216498_0746	SAMN05216498_1359	Diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.953
SDM83720.1	SDN38167.1	SAMN05216498_0746	SAMN05216498_2124	Diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.933
SDM83720.1	SDN67577.1	SAMN05216498_0746	SAMN05216498_2804	Diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.954
SDM87468.1	SDM83720.1	SAMN05216498_0874	SAMN05216498_0746	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.925
SDM87468.1	SDN07331.1	SAMN05216498_0874	SAMN05216498_1359	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.968
SDM87468.1	SDN22159.1	SAMN05216498_0874	SAMN05216498_1751	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.942
SDM87468.1	SDN37027.1	SAMN05216498_0874	SAMN05216498_2079	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.925
SDM87468.1	SDN38167.1	SAMN05216498_0874	SAMN05216498_2124	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.986
SDM87468.1	SDN38824.1	SAMN05216498_0874	SAMN05216498_2150	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase.	0.927
SDM87468.1	SDN51759.1	SAMN05216498_0874	SAMN05216498_2474	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Methyl-accepting chemotaxis protein.	0.925
SDM87468.1	SDN59774.1	SAMN05216498_0874	SAMN05216498_2617	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.925
SDM87468.1	SDN61607.1	SAMN05216498_0874	SAMN05216498_2680	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Chemotaxis protein methyltransferase CheR.	0.964
SDM87468.1	SDN67577.1	SAMN05216498_0874	SAMN05216498_2804	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.969
SDN07331.1	SDM83720.1	SAMN05216498_1359	SAMN05216498_0746	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.953
SDN07331.1	SDM87468.1	SAMN05216498_1359	SAMN05216498_0874	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.968
SDN07331.1	SDN22159.1	SAMN05216498_1359	SAMN05216498_1751	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.935
SDN07331.1	SDN37027.1	SAMN05216498_1359	SAMN05216498_2079	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase (GGDEF) domain-containing protein.	0.870
SDN07331.1	SDN38167.1	SAMN05216498_1359	SAMN05216498_2124	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.975
SDN07331.1	SDN38824.1	SAMN05216498_1359	SAMN05216498_2150	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	Diguanylate cyclase.	0.880

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Network Stats

number of nodes:

11

number of edges:

47

average node degree:

8.55

avg. local clustering coefficient:

0.846

expected number of edges:

12

PPI enrichment p-value:

4.9e-14

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0042126

Nitrate metabolic process

6 of 7

2.67

5.62

1.50e-11

GO:0042128

Nitrate assimilation

4 of 5

2.64

3.46

3.17e-07

GO:0043436

Oxoacid metabolic process

8 of 398

1.04

1.11

1.37e-05

GO:0044237

Cellular metabolic process

10 of 1623

0.53

0.41

0.0024

GO:0009987

Cellular process

11 of 2473

0.39

0.31

0.0051

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016661

Oxidoreductase activity, acting on other nitrogenous compounds as donors

5 of 6

2.66

4.54

2.29e-09

GO:0051536

Iron-sulfur cluster binding

6 of 52

1.8

2.87

9.68e-08

GO:0008940

Nitrate reductase activity

3 of 3

2.74

2.65

1.29e-05

GO:0015103

Inorganic anion transmembrane transporter activity

3 of 12

2.14

1.86

0.00024

GO:0015112

Nitrate transmembrane transporter activity

2 of 2

2.74

1.53

0.0016

(more ...)

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009325

Nitrate reductase complex

3 of 3

2.74

2.82

6.06e-06

GO:1990204

Oxidoreductase complex

4 of 18

2.09

2.56

5.80e-06

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:7093

Nitrate metabolic process, and Ferredoxin metabolic process

8 of 11

2.6

7.66

3.31e-16

CL:7058

Mixed, incl. Nitrate metabolic process, and Sulfate assimilation

9 of 29

2.23

6.65

3.31e-16

CL:7096

Nitrate reductase complex, and Nitrate import

5 of 5

2.74

5.04

2.88e-10

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00910

Nitrogen metabolism

8 of 21

2.32

6.65

2.15e-15

map01120

Microbial metabolism in diverse environments

9 of 414

1.08

1.33

1.21e-07

map01220

Degradation of aromatic compounds

3 of 47

1.54

1.11

0.0037

map00360

Phenylalanine metabolism

2 of 22

1.7

0.84

0.0217

map01100

Metabolic pathways

9 of 1771

0.44

0.32

0.0165

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0009344

Nitrite reductase complex [NAD(P)H]

2 of 2

2.74

1.26

0.0051

GOCC:0009325

Nitrate reductase complex

2 of 2

2.74

1.26

0.0051

GOCC:1990204

Oxidoreductase complex

3 of 41

1.6

1.07

0.0053

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0560

Oxidoreductase

6 of 379

0.94

0.69

0.0048

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13806

Rieske-like [2Fe-2S] domain

2 of 2

2.74

1.09

0.0105

PF01568

Molydopterin dinucleotide binding domain

2 of 3

2.56

1.09

0.0105

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