STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN07331.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (654 aa)    
Predicted Functional Partners:
SDN38167.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.975
SDN61607.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.969
SDM87468.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.968
SDN59774.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.956
SDM83720.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.953
SDN22159.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.935
SDM86062.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 
0.909
SDN51759.1
Methyl-accepting chemotaxis protein.
 
 0.908
SDN38824.1
Diguanylate cyclase.
0.880
SDN67577.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.876
Your Current Organism:
Tenuibacillus multivorans
NCBI taxonomy Id: 237069
Other names: AS 1.3442, CGMCC 1.3442, NBRC 100370, T. multivorans, Tenuibacillus multivorans Ren and Zhou 2005, cf. Filobacillus sp. 1, strain 28-1
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